Dynamic vegetation: No.
Nitrogen limitation: VISIT contains nitrogen cycle, but nitrogen limitation on production and decomposition was not activated (off) in the present simulations.
Co2 effects: CO2 affects directly stomatal conductance and photosynthetic rates, leading to many indirect impacts on carbon and hydrological cycles.
Light interception: Canopy light interception was calculated using Lambert-Beer law as a function of leaf area index and attenuation constant.
Phenology: In deciduous forests and grasslands, leaf phenology was simulated as functions of cumulative temperature and drought stress.
Water stress: Water stress on photosynthesis and microbial decomposition were included in empirical manners.
Heat stress: No heat stress was considered, except photosynthetic decline above optimal temperature.
Evapo-transpiration approach: Penman-Monteith with soil water limitation.
Root distribution over depth: Biome-specific rooting distribution by Zeng (2001).
Zeng, X. Global vegetation root distribution for land modeling. Journal of Hydrometeorology 2, 525-530 (2001).
Closed energy balance: Not strictly, because sensible heat and ground heat fluxes were not calculated.
Coupling/feedback between soil moisture and surface temperature: Soil physical coupling / feedback was not simulated.
Latent heat: Simply converted from evapotranspiration rate.
Sensible heat: Not calculated.
How do you compute soil organic carbon during land use (do you mix the previous pft soc into agricultural soc)?: The present model did not mix the previous SOC into agricultural SOC. They were separately simulated, and then land-use change should dilute or condense carbon stock per area.
Do you separate soil organic carbon in pasture from natural grass?: No.
Do you harvest npp of crops? do you including grazing? how does harvested npp decay?: In cropland, a certain fraction (yield) of crop was harvested, but we did not consider their decay.
How do you to treat biofuel npp and biofuel harvest?: No biofuel.
Does non-harvested crop npp go to litter in your output?: Yes, a part of crop residue went to litter.